Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.95□□□□□ -0.5
RTL8CO15255 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 AC005332.7-201ENST00000614046 2005 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RTL8CO15255 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 AC211486.1-202ENST00000416371 468 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 LAGE3P1-201ENST00000425356 484 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 AC211476.1-201ENST00000503899 468 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.95□□□□□ -0.5
RTL8CO15255 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.95□□□□□ -0.5
RTL8CO15255 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.95□□□□□ -0.5
RTL8CO15255 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 MTDHP5-201ENST00000598980 586 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.95□□□□□ -0.5
RTL8CO15255 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.95□□□□□ -0.5
RTL8CO15255 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 AL049812.1-201ENST00000432563 2267 ntBASIC11.95□□□□□ -0.5
RTL8CO15255 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RTL8CO15255 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTL8CO15255 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 KRT18P28-201ENST00000453838 1332 ntBASIC11.94□□□□□ -0.5
RTL8CO15255 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.94□□□□□ -0.5
RTL8CO15255 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.94□□□□□ -0.5
RTL8CO15255 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 AP006288.1-201ENST00000446065 395 ntBASIC11.94□□□□□ -0.5
RTL8CO15255 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.94□□□□□ -0.5
RTL8CO15255 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.94□□□□□ -0.5
RTL8CO15255 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.94□□□□□ -0.5
RTL8CO15255 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 AC020763.4-201ENST00000623414 4170 ntBASIC11.94□□□□□ -0.5
RTL8CO15255 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 USP39-202ENST00000409025 1946 ntTSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTL8CO15255 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC11.94□□□□□ -0.5
RTL8CO15255 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTL8CO15255 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.93□□□□□ -0.5
RTL8CO15255 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC11.93□□□□□ -0.5
RTL8CO15255 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RTL8CO15255 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.93□□□□□ -0.5
RTL8CO15255 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.93□□□□□ -0.5
RTL8CO15255 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC11.93□□□□□ -0.5
RTL8CO15255 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
RTL8CO15255 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.93□□□□□ -0.5
RTL8CO15255 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.93□□□□□ -0.5
RTL8CO15255 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTL8CO15255 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms