Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.09■□□□□ 0.33
CASQ2O14958 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 LSM12P1-201ENST00000411836 588 ntBASIC17.09■□□□□ 0.33
CASQ2O14958 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.09■□□□□ 0.33
CASQ2O14958 HLA-A-209ENST00000638375 975 ntBASIC17.09■□□□□ 0.33
CASQ2O14958 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CASQ2O14958 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.09■□□□□ 0.33
CASQ2O14958 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CASQ2O14958 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 MST1L-201ENST00000442552 2185 ntBASIC17.09■□□□□ 0.33
CASQ2O14958 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.09■□□□□ 0.33
CASQ2O14958 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.08■□□□□ 0.33
CASQ2O14958 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASQ2O14958 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CASQ2O14958 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASQ2O14958 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.08■□□□□ 0.33
CASQ2O14958 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
CASQ2O14958 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.08■□□□□ 0.33
CASQ2O14958 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASQ2O14958 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CASQ2O14958 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASQ2O14958 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASQ2O14958 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.08■□□□□ 0.33
CASQ2O14958 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.08■□□□□ 0.33
CASQ2O14958 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.08■□□□□ 0.32
CASQ2O14958 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.08■□□□□ 0.32
CASQ2O14958 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.08■□□□□ 0.32
CASQ2O14958 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.08■□□□□ 0.32
CASQ2O14958 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.08■□□□□ 0.32
CASQ2O14958 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 AC006557.6-201ENST00000623071 864 ntBASIC17.08■□□□□ 0.32
CASQ2O14958 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.08■□□□□ 0.32
CASQ2O14958 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.08■□□□□ 0.32
CASQ2O14958 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CASQ2O14958 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASQ2O14958 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CASQ2O14958 AC093010.1-201ENST00000473625 1624 ntBASIC17.07■□□□□ 0.32
CASQ2O14958 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 AL596257.1-201ENST00000641463 2694 ntBASIC17.07■□□□□ 0.32
CASQ2O14958 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CASQ2O14958 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.07■□□□□ 0.32
CASQ2O14958 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.07■□□□□ 0.32
CASQ2O14958 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.07■□□□□ 0.32
CASQ2O14958 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CASQ2O14958 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.07■□□□□ 0.32
CASQ2O14958 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.07■□□□□ 0.32
CASQ2O14958 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.07■□□□□ 0.32
CASQ2O14958 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CASQ2O14958 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CASQ2O14958 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CASQ2O14958 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CASQ2O14958 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASQ2O14958 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CASQ2O14958 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CASQ2O14958 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms