Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 IGHV3-47-201ENST00000425060 335 ntBASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 MINOS1P3-201ENST00000457048 203 ntBASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 GMCL1P1-201ENST00000463439 1581 ntBASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA2E9PIF3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 KRT8P10-201ENST00000450021 1447 ntBASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 AC091607.1-201ENST00000490318 1060 ntBASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 AC008687.5-201ENST00000593746 558 ntBASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPIPA2E9PIF3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 SDHAP2-201ENST00000455183 2001 ntBASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 NUS1P2-201ENST00000417358 873 ntBASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms