Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 AC011506.1-201ENST00000474329 610 ntBASIC18.65■□□□□ 0.58
SRRM3A6NNA2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 AC008556.1-201ENST00000610908 2040 ntBASIC18.65■□□□□ 0.58
SRRM3A6NNA2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.65■□□□□ 0.58
SRRM3A6NNA2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM3A6NNA2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.65■□□□□ 0.58
SRRM3A6NNA2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 AC018695.7-201ENST00000624587 2492 ntBASIC18.64■□□□□ 0.57
SRRM3A6NNA2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.64■□□□□ 0.57
SRRM3A6NNA2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 FAAHP1-202ENST00000446499 1238 ntBASIC18.63■□□□□ 0.57
SRRM3A6NNA2 AL136038.3-201ENST00000561909 1096 ntBASIC18.63■□□□□ 0.57
SRRM3A6NNA2 PRELID1P1-202ENST00000567272 903 ntBASIC18.63■□□□□ 0.57
SRRM3A6NNA2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 AC111152.3-201ENST00000569699 673 ntBASIC18.63■□□□□ 0.57
SRRM3A6NNA2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
SRRM3A6NNA2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 CKBP1-201ENST00000565489 1086 ntBASIC18.62■□□□□ 0.57
SRRM3A6NNA2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms