Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM9A6NGZ8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 DRAXINP1-201ENST00000437611 948 ntBASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AC124864.1-201ENST00000623408 392 ntBASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 KRT18P1-202ENST00000452408 1331 ntBASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AL096828.2-201ENST00000567259 1965 ntBASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM9A6NGZ8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 AC135776.1-201ENST00000319817 2481 ntBASIC13□□□□□ -0.33
SMIM9A6NGZ8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13□□□□□ -0.33
SMIM9A6NGZ8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 FLJ13224-201ENST00000313737 1514 ntBASIC13□□□□□ -0.33
SMIM9A6NGZ8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13□□□□□ -0.33
SMIM9A6NGZ8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM9A6NGZ8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms