Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AC007326.2-201ENST00000624224 7579 ntBASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AC128676.1-201ENST00000454392 318 ntBASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 RPPH1-201ENST00000516869 333 ntBASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SLC25A1P4-201ENST00000567977 778 ntBASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AL023806.1-201ENST00000603994 1649 ntBASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV3D-20A0A0C4DH25 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 FAM197Y1-201ENST00000421178 764 ntBASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CA15P1-201ENST00000481698 905 ntBASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 MIR4674-201ENST00000582457 87 ntBASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 DGCR10-201ENST00000609839 495 ntBASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 HOXB1-202ENST00000577092 1414 ntBASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-20A0A0C4DH25 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-20A0A0C4DH25 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-20A0A0C4DH25 AD000864.1-201ENST00000624076 2295 ntBASIC13.37□□□□□ -0.27
IGKV3D-20A0A0C4DH25 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-20A0A0C4DH25 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms