Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 AC011498.5-201ENST00000592027 486 ntBASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 AC116407.4-201ENST00000623319 1061 ntBASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 AC068880.1-201ENST00000507289 2297 ntBASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 ESPNP-201ENST00000270691 2015 ntBASIC17.03■□□□□ 0.32
CLCA3PQ9Y6N3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 AC090164.3-201ENST00000610780 2143 ntBASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCA3PQ9Y6N3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCA3PQ9Y6N3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms