Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 RNPS1P1-201ENST00000507437 918 ntBASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 AC073648.2-201ENST00000510116 352 ntBASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 MTDHP3-201ENST00000594186 672 ntBASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 AC117500.6-201ENST00000624871 588 ntBASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 AL499627.1-201ENST00000569373 2188 ntBASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CSNK1G3Q9Y6M4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.58■□□□□ 0.41
CSNK1G3Q9Y6M4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1G3Q9Y6M4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1G3Q9Y6M4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CSNK1G3Q9Y6M4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 PMS2P1-201ENST00000431037 1228 ntBASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1G3Q9Y6M4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 RPS2P28-201ENST00000314255 741 ntBASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 ABCD1P5-201ENST00000445663 754 ntBASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 AC112698.1-201ENST00000510299 916 ntBASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 AP001269.4-201ENST00000609611 512 ntBASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1G3Q9Y6M4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AP005117.1-201ENST00000584346 1413 ntBASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC148477.8-201ENST00000624298 468 ntBASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AF228730.7-201ENST00000641842 219 ntBASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms