Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 CRYGEP-201ENST00000412192 528 ntBASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 AC027796.2-201ENST00000575326 344 ntBASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AC022898.2-201ENST00000616822 1312 ntBASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AL020989.1-201ENST00000422979 469 ntBASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AC019129.2-201ENST00000609837 1235 ntBASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AC005593.1-201ENST00000624894 515 ntBASIC19.58■□□□□ 0.73
SCN10AQ9Y5Y9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.58■□□□□ 0.72
SCN10AQ9Y5Y9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN10AQ9Y5Y9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.58■□□□□ 0.72
SCN10AQ9Y5Y9 AL049757.1-201ENST00000616842 1596 ntBASIC19.58■□□□□ 0.72
SCN10AQ9Y5Y9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN10AQ9Y5Y9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN10AQ9Y5Y9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AC004706.3-202ENST00000621574 984 ntBASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AC092865.6-201ENST00000642101 219 ntBASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN10AQ9Y5Y9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 YBX1P5-201ENST00000509441 847 ntBASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 AC010654.1-201ENST00000615722 808 ntBASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 AL805961.1-202ENST00000641562 540 ntBASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SCN10AQ9Y5Y9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 AC008667.4-201ENST00000607370 168 ntBASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 COX5BP2-201ENST00000392354 334 ntBASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 AL096828.2-201ENST00000567259 1965 ntBASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN10AQ9Y5Y9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.54■□□□□ 0.72
SCN10AQ9Y5Y9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms