Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 AC099791.1-201ENST00000416440 715 ntBASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC1Q9Y5R8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 AC009299.2-201ENST00000482477 511 ntBASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 AC007950.2-201ENST00000615045 2347 ntBASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAPPC1Q9Y5R8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms