Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.4■□□□□ 0.7
USP15Q9Y4E8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP15Q9Y4E8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
USP15Q9Y4E8 AL031598.1-201ENST00000561511 1773 ntBASIC19.39■□□□□ 0.7
USP15Q9Y4E8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.39■□□□□ 0.7
USP15Q9Y4E8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 AC009065.1-201ENST00000564055 1225 ntBASIC19.39■□□□□ 0.69
USP15Q9Y4E8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.39■□□□□ 0.69
USP15Q9Y4E8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.39■□□□□ 0.69
USP15Q9Y4E8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 MIR940-201ENST00000401276 94 ntBASIC19.38■□□□□ 0.69
USP15Q9Y4E8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 AL512353.2-201ENST00000448759 1962 ntBASIC19.38■□□□□ 0.69
USP15Q9Y4E8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 AC024563.2-201ENST00000603282 481 ntBASIC19.38■□□□□ 0.69
USP15Q9Y4E8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP15Q9Y4E8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 POM121L3P-201ENST00000419331 1163 ntBASIC19.37■□□□□ 0.69
USP15Q9Y4E8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 AC011840.4-201ENST00000578471 627 ntBASIC19.37■□□□□ 0.69
USP15Q9Y4E8 AL591684.3-201ENST00000605187 298 ntBASIC19.37■□□□□ 0.69
USP15Q9Y4E8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP15Q9Y4E8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP15Q9Y4E8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP15Q9Y4E8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP15Q9Y4E8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms