Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 AP006294.2-201ENST00000641667 209 ntBASIC21.15■□□□□ 0.98
SMC3Q9UQE7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 AC100803.2-201ENST00000562459 1963 ntBASIC21.15■□□□□ 0.98
SMC3Q9UQE7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SMC3Q9UQE7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 TSPY15P-201ENST00000457163 923 ntBASIC21.14■□□□□ 0.97
SMC3Q9UQE7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 TMEM191A-211ENST00000637163 1067 ntBASIC21.14■□□□□ 0.97
SMC3Q9UQE7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 AC141586.5-201ENST00000624546 2050 ntBASIC21.14■□□□□ 0.97
SMC3Q9UQE7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMC3Q9UQE7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 AL355312.1-201ENST00000407115 2176 ntBASIC21.13■□□□□ 0.97
SMC3Q9UQE7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 SIRPAP1-201ENST00000448467 1770 ntBASIC21.13■□□□□ 0.97
SMC3Q9UQE7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 AC010947.1-201ENST00000623454 693 ntBASIC21.13■□□□□ 0.97
SMC3Q9UQE7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 AC108860.2-201ENST00000562760 2183 ntBASIC21.13■□□□□ 0.97
SMC3Q9UQE7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.13■□□□□ 0.97
SMC3Q9UQE7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 NAPSB-206ENST00000562112 1266 ntBASIC21.12■□□□□ 0.97
SMC3Q9UQE7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms