Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 AC026271.3-201ENST00000571884 352 ntBASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 C1QBPP2-201ENST00000528754 825 ntBASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SPTLC3Q9NUV7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SPTLC3Q9NUV7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 AC128676.1-201ENST00000454392 318 ntBASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 B3GAT3P1-201ENST00000471720 806 ntBASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTLC3Q9NUV7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 AF186192.3-201ENST00000583427 947 ntBASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 MIR6786-201ENST00000616843 113 ntBASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 AC103702.1-201ENST00000548801 2630 ntBASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTLC3Q9NUV7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms