Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.02■□□□□ 0.64
TLR9Q9NR96 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
TLR9Q9NR96 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TLR9Q9NR96 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.02■□□□□ 0.64
TLR9Q9NR96 MIR1199-201ENST00000621445 119 ntBASIC19.02■□□□□ 0.64
TLR9Q9NR96 AL022326.1-202ENST00000641533 845 ntBASIC19.02■□□□□ 0.64
TLR9Q9NR96 AC134684.3-201ENST00000641758 218 ntBASIC19.02■□□□□ 0.64
TLR9Q9NR96 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 AC079776.2-201ENST00000641154 1609 ntBASIC19.02■□□□□ 0.64
TLR9Q9NR96 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.02■□□□□ 0.64
TLR9Q9NR96 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TLR9Q9NR96 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TLR9Q9NR96 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TLR9Q9NR96 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AC097374.2-201ENST00000618617 1306 ntBASIC19.01■□□□□ 0.63
TLR9Q9NR96 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.01■□□□□ 0.63
TLR9Q9NR96 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TLR9Q9NR96 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TLR9Q9NR96 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19■□□□□ 0.63
TLR9Q9NR96 COA5-202ENST00000409997 557 ntTSL 4 BASIC19■□□□□ 0.63
TLR9Q9NR96 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19■□□□□ 0.63
TLR9Q9NR96 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19■□□□□ 0.63
TLR9Q9NR96 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19■□□□□ 0.63
TLR9Q9NR96 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TLR9Q9NR96 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 AP000974.1-201ENST00000623909 2387 ntBASIC19■□□□□ 0.63
TLR9Q9NR96 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TLR9Q9NR96 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TLR9Q9NR96 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19■□□□□ 0.63
TLR9Q9NR96 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms