Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ARHGEF3Q9NR81 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF3Q9NR81 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
ARHGEF3Q9NR81 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF3Q9NR81 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 AC008556.1-201ENST00000610908 2040 ntBASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 RNA5SP419-201ENST00000515908 135 ntBASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 SLC25A1P1-201ENST00000528351 927 ntBASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF3Q9NR81 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF3Q9NR81 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF3Q9NR81 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF3Q9NR81 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 FP475955.4-201ENST00000623131 1990 ntBASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF3Q9NR81 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 MIR1233-2-201ENST00000408138 82 ntBASIC19■□□□□ 0.63
ARHGEF3Q9NR81 MIR1233-1-201ENST00000408722 82 ntBASIC19■□□□□ 0.63
ARHGEF3Q9NR81 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 RN7SL606P-201ENST00000472779 293 ntBASIC19■□□□□ 0.63
ARHGEF3Q9NR81 KRT18P58-201ENST00000527480 1120 ntBASIC19■□□□□ 0.63
ARHGEF3Q9NR81 AC092865.5-201ENST00000545435 363 ntBASIC19■□□□□ 0.63
ARHGEF3Q9NR81 ABR-217ENST00000572441 563 ntTSL 4 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
ARHGEF3Q9NR81 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF3Q9NR81 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms