Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 AP000525.1-201ENST00000608286 694 ntBASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 AL118508.1-201ENST00000613502 2345 ntBASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC52A3Q9NQ40 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 TSPY14P-201ENST00000303979 915 ntBASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 AGGF1P2-201ENST00000426656 2106 ntBASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 MIR3917-201ENST00000580971 93 ntBASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 AC024243.1-201ENST00000609234 778 ntBASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC52A3Q9NQ40 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 AL158047.1-201ENST00000445918 881 ntBASIC17■□□□□ 0.31
SLC52A3Q9NQ40 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 AC093827.2-201ENST00000512654 315 ntBASIC17■□□□□ 0.31
SLC52A3Q9NQ40 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 DET1-205ENST00000558413 583 ntTSL 4 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17■□□□□ 0.31
SLC52A3Q9NQ40 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 KRT8P47-201ENST00000604727 1398 ntBASIC17■□□□□ 0.31
SLC52A3Q9NQ40 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17■□□□□ 0.31
SLC52A3Q9NQ40 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC52A3Q9NQ40 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms