Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AF186996.4-201ENST00000467186 377 ntBASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AC005336.2-201ENST00000593183 939 ntBASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AC008608.2-201ENST00000606089 416 ntBASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AF228730.7-201ENST00000641842 219 ntBASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 RCN1P2-201ENST00000398357 915 ntBASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 AL031284.1-201ENST00000419297 478 ntBASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 WIZP1-201ENST00000531444 2299 ntBASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF3Q9HD45 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 PMS2P1-201ENST00000431037 1228 ntBASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AC068472.1-201ENST00000474589 881 ntBASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AC148477.8-201ENST00000624298 468 ntBASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms