Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 AC079781.3-201ENST00000449110 356 ntBASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 AC006538.3-201ENST00000612495 578 ntBASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR1BQ9H9Y6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 AC104819.1-201ENST00000504587 486 ntBASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 AL662844.1-201ENST00000546340 181 ntBASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 AC004263.2-201ENST00000617183 678 ntBASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.82■□□□□ 0.44
POLR1BQ9H9Y6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 SDHAP1-207ENST00000440850 2000 ntBASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 AC106795.1-205ENST00000512851 1056 ntBASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 AC090616.6-201ENST00000582640 721 ntBASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 Z98044.1-201ENST00000632503 1764 ntBASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR1BQ9H9Y6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
POLR1BQ9H9Y6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms