Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC079602.3-201ENST00000623931 403 ntBASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 LINC00602-201ENST00000629776 2065 ntBASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 AC006116.8-202ENST00000587620 1550 ntBASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 AC211429.1-201ENST00000415277 523 ntBASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 AC117947.1-201ENST00000427448 529 ntBASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 LINC01023-201ENST00000606054 436 ntBASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC40Q9H9A6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 AC012317.2-201ENST00000623305 2251 ntBASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRRC40Q9H9A6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
LRRC40Q9H9A6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms