Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC012005.2-201ENST00000624333 397 ntBASIC20.07■□□□□ 0.8
RNF39Q9H2S5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 AC093525.10-201ENST00000625130 1569 ntBASIC20.07■□□□□ 0.8
RNF39Q9H2S5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF39Q9H2S5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 GTF2IP5-201ENST00000414608 731 ntBASIC20.06■□□□□ 0.8
RNF39Q9H2S5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 KRT8P26-201ENST00000534154 1276 ntBASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 MIR3180-4-201ENST00000582223 153 ntBASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AL121894.2-201ENST00000602977 491 ntBASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AC083906.6-201ENST00000641366 219 ntBASIC20.06■□□□□ 0.8
RNF39Q9H2S5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF39Q9H2S5 AL390862.1-201ENST00000635467 1469 ntBASIC20.05■□□□□ 0.8
RNF39Q9H2S5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 TSPY22P-201ENST00000427496 604 ntBASIC20.05■□□□□ 0.8
RNF39Q9H2S5 GTF3AP6-201ENST00000432585 986 ntBASIC20.05■□□□□ 0.8
RNF39Q9H2S5 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 AC008592.3-201ENST00000514941 418 ntBASIC20.05■□□□□ 0.8
RNF39Q9H2S5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.05■□□□□ 0.8
RNF39Q9H2S5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 DDX43P2-201ENST00000604753 1354 ntBASIC20.05■□□□□ 0.8
RNF39Q9H2S5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF39Q9H2S5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RNF39Q9H2S5 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms