Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 SETP21-201ENST00000514799 892 ntBASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 AC137695.2-201ENST00000603123 754 ntBASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 BUB1P1-201ENST00000603541 607 ntBASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 C1orf229-201ENST00000623686 2258 ntBASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 AC006042.3-201ENST00000454684 1469 ntBASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KRTAP3-3Q9BYR6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 SAA2-202ENST00000414546 1022 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 CARM1P1-201ENST00000426329 1185 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 VN1R54P-201ENST00000435210 1049 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 TARDBPP2-201ENST00000448913 1231 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC00900-202ENST00000501294 982 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 MYL12BP2-201ENST00000503948 512 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC147055.4-201ENST00000504399 745 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01095-203ENST00000512063 1175 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 MINCR-201ENST00000517411 645 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 C14orf159-208ENST00000517877 591 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC020937.1-201ENST00000519677 1013 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 EIF4A2P3-201ENST00000525903 1055 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AL138976.2-201ENST00000563989 694 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC092325.1-201ENST00000566449 554 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC090616.1-201ENST00000583895 447 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01440-203ENST00000596828 1005 ntTSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AP001981.2-201ENST00000603241 418 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC107952.2-201ENST00000606048 486 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AC004477.3-201ENST00000614061 590 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 FRG1DP-201ENST00000635586 771 ntBASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-3Q9BYR6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-3Q9BYR6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms