Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 BUB3-202ENST00000368859 667 ntTSL 3 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 C2orf69P3-201ENST00000565542 1120 ntBASIC10.76□□□□□ -0.69
LIMD2Q9BT23 GRAP-204ENST00000573099 846 ntTSL 3 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LIMD2Q9BT23 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AC073592.3-201ENST00000625118 1834 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AC068418.2-201ENST00000577309 3703 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AC008894.3-201ENST00000624324 3103 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 SLC25A1P2-201ENST00000430693 912 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TSPY17P-201ENST00000450329 467 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AC008550.1-201ENST00000511500 884 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AP003071.4-201ENST00000562276 1284 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AL512604.3-201ENST00000569583 964 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TMEM191A-211ENST00000637163 1067 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 AC034236.2-201ENST00000606662 1610 ntBASIC10.75□□□□□ -0.69
LIMD2Q9BT23 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LIMD2Q9BT23 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 AL162741.1-201ENST00000565563 1558 ntBASIC10.74□□□□□ -0.69
LIMD2Q9BT23 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
LIMD2Q9BT23 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms