Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 AP000523.1-201ENST00000398242 1049 ntBASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.97■□□□□ 0.31
YIPF4Q9BSR8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 LINC01238-205ENST00000567549 1107 ntBASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
YIPF4Q9BSR8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
YIPF4Q9BSR8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 AC104076.2-201ENST00000448912 469 ntBASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 AL441883.1-201ENST00000566170 1045 ntBASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 AC012317.2-201ENST00000623305 2251 ntBASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms