Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 AC132008.2-207ENST00000454517 770 ntBASIC20.89■□□□□ 0.93
SLF1Q9BQI6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 AC009533.2-201ENST00000543664 586 ntBASIC20.89■□□□□ 0.93
SLF1Q9BQI6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 AL031598.1-201ENST00000561511 1773 ntBASIC20.89■□□□□ 0.93
SLF1Q9BQI6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 GMCL1P1-201ENST00000463439 1581 ntBASIC20.89■□□□□ 0.93
SLF1Q9BQI6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.89■□□□□ 0.93
SLF1Q9BQI6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.88■□□□□ 0.93
SLF1Q9BQI6 AC079776.4-201ENST00000511039 504 ntBASIC20.88■□□□□ 0.93
SLF1Q9BQI6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLF1Q9BQI6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 AC125634.1-201ENST00000438758 1403 ntBASIC20.87■□□□□ 0.93
SLF1Q9BQI6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
SLF1Q9BQI6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 HLA-A-201ENST00000376802 1334 ntBASIC20.86■□□□□ 0.93
SLF1Q9BQI6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLF1Q9BQI6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms