Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NPAS2Q99743 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 AC084018.2-201ENST00000613093 2607 ntBASIC17.64■□□□□ 0.41
NPAS2Q99743 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NPAS2Q99743 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS2Q99743 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS2Q99743 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS2Q99743 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NPAS2Q99743 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS2Q99743 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS2Q99743 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS2Q99743 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS2Q99743 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS2Q99743 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS2Q99743 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NPAS2Q99743 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 GMCL1P1-201ENST00000463439 1581 ntBASIC17.62■□□□□ 0.41
NPAS2Q99743 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NPAS2Q99743 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS2Q99743 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS2Q99743 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
NPAS2Q99743 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS2Q99743 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPAS2Q99743 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS2Q99743 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS2Q99743 KRT18P41-201ENST00000518924 1277 ntBASIC17.62■□□□□ 0.41
NPAS2Q99743 AP003041.3-201ENST00000527151 707 ntBASIC17.62■□□□□ 0.41
NPAS2Q99743 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPAS2Q99743 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPAS2Q99743 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS2Q99743 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 AC006116.8-202ENST00000587620 1550 ntBASIC17.62■□□□□ 0.41
NPAS2Q99743 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS2Q99743 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NPAS2Q99743 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS2Q99743 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS2Q99743 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
NPAS2Q99743 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.61■□□□□ 0.41
NPAS2Q99743 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.61■□□□□ 0.41
NPAS2Q99743 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS2Q99743 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS2Q99743 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.61■□□□□ 0.41
NPAS2Q99743 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NPAS2Q99743 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
NPAS2Q99743 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS2Q99743 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
NPAS2Q99743 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS2Q99743 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms