Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDCA3Q99618 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CDCA3Q99618 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDCA3Q99618 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CDCA3Q99618 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CDCA3Q99618 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
CDCA3Q99618 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDCA3Q99618 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.62■□□□□ 0.57
CDCA3Q99618 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.62■□□□□ 0.57
CDCA3Q99618 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.62■□□□□ 0.57
CDCA3Q99618 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.62■□□□□ 0.57
CDCA3Q99618 SIGLEC30P-201ENST00000455569 941 ntBASIC18.62■□□□□ 0.57
CDCA3Q99618 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.62■□□□□ 0.57
CDCA3Q99618 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.62■□□□□ 0.57
CDCA3Q99618 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDCA3Q99618 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.62■□□□□ 0.57
CDCA3Q99618 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.62■□□□□ 0.57
CDCA3Q99618 AL078644.1-201ENST00000609881 752 ntBASIC18.62■□□□□ 0.57
CDCA3Q99618 AC010654.1-201ENST00000615722 808 ntBASIC18.62■□□□□ 0.57
CDCA3Q99618 GPR89P-201ENST00000407924 1495 ntBASIC18.62■□□□□ 0.57
CDCA3Q99618 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDCA3Q99618 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDCA3Q99618 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDCA3Q99618 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA3Q99618 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA3Q99618 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA3Q99618 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA3Q99618 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA3Q99618 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA3Q99618 AC003669.1-201ENST00000334569 611 ntBASIC18.61■□□□□ 0.57
CDCA3Q99618 FAM8A3P-201ENST00000427218 844 ntBASIC18.61■□□□□ 0.57
CDCA3Q99618 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA3Q99618 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.61■□□□□ 0.57
CDCA3Q99618 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA3Q99618 AC004790.2-201ENST00000623588 572 ntBASIC18.61■□□□□ 0.57
CDCA3Q99618 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.61■□□□□ 0.57
CDCA3Q99618 AL805961.1-202ENST00000641562 540 ntBASIC18.61■□□□□ 0.57
CDCA3Q99618 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA3Q99618 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.61■□□□□ 0.57
CDCA3Q99618 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDCA3Q99618 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDCA3Q99618 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA3Q99618 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDCA3Q99618 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA3Q99618 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDCA3Q99618 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.6■□□□□ 0.57
CDCA3Q99618 ACTG1P14-201ENST00000446382 1122 ntBASIC18.6■□□□□ 0.57
CDCA3Q99618 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA3Q99618 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDCA3Q99618 DUTP2-201ENST00000519164 463 ntBASIC18.6■□□□□ 0.57
CDCA3Q99618 PDPK2P-202ENST00000562415 1191 ntBASIC18.6■□□□□ 0.57
CDCA3Q99618 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.6■□□□□ 0.57
CDCA3Q99618 AC011467.4-201ENST00000594891 528 ntBASIC18.6■□□□□ 0.57
CDCA3Q99618 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.6■□□□□ 0.57
CDCA3Q99618 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.6■□□□□ 0.57
CDCA3Q99618 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.6■□□□□ 0.57
CDCA3Q99618 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDCA3Q99618 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
CDCA3Q99618 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.59■□□□□ 0.57
CDCA3Q99618 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.59■□□□□ 0.57
CDCA3Q99618 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.59■□□□□ 0.57
CDCA3Q99618 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CDCA3Q99618 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.59■□□□□ 0.57
CDCA3Q99618 MIR770-201ENST00000390219 98 ntBASIC18.59■□□□□ 0.57
CDCA3Q99618 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDCA3Q99618 MRPL20P1-201ENST00000400819 433 ntBASIC18.59■□□□□ 0.57
CDCA3Q99618 KLF4P1-201ENST00000412782 1185 ntBASIC18.59■□□□□ 0.57
CDCA3Q99618 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms