Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 AL391005.1-201ENST00000623953 2435 ntBASIC18.08■□□□□ 0.48
NDNQ99608 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.08■□□□□ 0.48
NDNQ99608 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.08■□□□□ 0.48
NDNQ99608 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
NDNQ99608 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NDNQ99608 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.07■□□□□ 0.48
NDNQ99608 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NDNQ99608 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 ECEL1P3-201ENST00000427961 737 ntBASIC18.07■□□□□ 0.48
NDNQ99608 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.07■□□□□ 0.48
NDNQ99608 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NDNQ99608 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 AC012317.2-201ENST00000623305 2251 ntBASIC18.07■□□□□ 0.48
NDNQ99608 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
NDNQ99608 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDNQ99608 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NDNQ99608 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.06■□□□□ 0.48
NDNQ99608 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.06■□□□□ 0.48
NDNQ99608 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NDNQ99608 KRT18P22-201ENST00000402024 1347 ntBASIC18.06■□□□□ 0.48
NDNQ99608 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 GNAS-203ENST00000306120 1878 ntBASIC18.06■□□□□ 0.48
NDNQ99608 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NDNQ99608 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.06■□□□□ 0.48
NDNQ99608 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NDNQ99608 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.06■□□□□ 0.48
NDNQ99608 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.06■□□□□ 0.48
NDNQ99608 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.06■□□□□ 0.48
NDNQ99608 AL512604.3-201ENST00000569583 964 ntBASIC18.06■□□□□ 0.48
NDNQ99608 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.06■□□□□ 0.48
NDNQ99608 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDNQ99608 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.06■□□□□ 0.48
NDNQ99608 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NDNQ99608 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.06■□□□□ 0.48
NDNQ99608 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
NDNQ99608 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDNQ99608 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.05■□□□□ 0.48
NDNQ99608 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NDNQ99608 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.05■□□□□ 0.48
NDNQ99608 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NDNQ99608 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NDNQ99608 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NDNQ99608 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NDNQ99608 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.05■□□□□ 0.48
NDNQ99608 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.05■□□□□ 0.48
NDNQ99608 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.05■□□□□ 0.48
NDNQ99608 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.05■□□□□ 0.48
NDNQ99608 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
NDNQ99608 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDNQ99608 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.04■□□□□ 0.48
NDNQ99608 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms