Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 ESRRAP1-201ENST00000400596 1257 ntBASIC14.61□□□□□ -0.07
RAB40CQ96S21 AL023284.2-201ENST00000405850 579 ntBASIC14.61□□□□□ -0.07
RAB40CQ96S21 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 AC011298.2-201ENST00000617989 482 ntBASIC14.61□□□□□ -0.07
RAB40CQ96S21 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB40CQ96S21 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40CQ96S21 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40CQ96S21 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40CQ96S21 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 CROCCP2-202ENST00000412962 2773 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms