Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 AC026471.5-201ENST00000615068 467 ntBASIC17■□□□□ 0.31
SLC47A1Q96FL8 REXO1L10P-201ENST00000615707 1290 ntBASIC17■□□□□ 0.31
SLC47A1Q96FL8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 REXO1L12P-201ENST00000622156 912 ntBASIC17■□□□□ 0.31
SLC47A1Q96FL8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 GPAT2P1-201ENST00000444924 1672 ntBASIC17■□□□□ 0.31
SLC47A1Q96FL8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 AC022211.2-201ENST00000585075 2527 ntBASIC17■□□□□ 0.31
SLC47A1Q96FL8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC47A1Q96FL8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC47A1Q96FL8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 AP001094.4-201ENST00000579008 2176 ntBASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 MIR149-201ENST00000384879 89 ntBASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 CRYGFP-201ENST00000418459 633 ntBASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC47A1Q96FL8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 AL163051.1-201ENST00000569214 1512 ntBASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC47A1Q96FL8 MIR718-201ENST00000390190 70 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms