Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2E3Q969T4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2E3Q969T4 GNAS-203ENST00000306120 1878 ntBASIC17.33■□□□□ 0.37
UBE2E3Q969T4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2E3Q969T4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2E3Q969T4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2E3Q969T4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2E3Q969T4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 HBZP1-201ENST00000354915 429 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 MIR662-201ENST00000384847 95 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 AC112907.2-201ENST00000448639 330 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 AC104076.2-201ENST00000448912 469 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 AL359075.1-203ENST00000462729 1002 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 AC092597.1-201ENST00000487352 616 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 AC116407.2-201ENST00000613639 860 ntBASIC17.33■□□□□ 0.36
UBE2E3Q969T4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
UBE2E3Q969T4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 RCN1P1-201ENST00000400413 996 ntBASIC17.32■□□□□ 0.36
UBE2E3Q969T4 AP003733.1-201ENST00000491725 852 ntBASIC17.32■□□□□ 0.36
UBE2E3Q969T4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2E3Q969T4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 TMPOP1-202ENST00000424642 1267 ntBASIC17.31■□□□□ 0.36
UBE2E3Q969T4 KRT18P38-201ENST00000449496 1282 ntBASIC17.31■□□□□ 0.36
UBE2E3Q969T4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 RN7SL850P-201ENST00000579959 291 ntBASIC17.31■□□□□ 0.36
UBE2E3Q969T4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 AC068880.1-201ENST00000507289 2297 ntBASIC17.31■□□□□ 0.36
UBE2E3Q969T4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBE2E3Q969T4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms