Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS3Q969F9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS3Q969F9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 AL671277.2-201ENST00000458060 996 ntBASIC19.95■□□□□ 0.78
HPS3Q969F9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.95■□□□□ 0.78
HPS3Q969F9 AC113404.2-201ENST00000507884 177 ntBASIC19.95■□□□□ 0.78
HPS3Q969F9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS3Q969F9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS3Q969F9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS3Q969F9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS3Q969F9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HPS3Q969F9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.95■□□□□ 0.78
HPS3Q969F9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HPS3Q969F9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
HPS3Q969F9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS3Q969F9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HPS3Q969F9 FAM210CP-201ENST00000445714 574 ntBASIC19.94■□□□□ 0.78
HPS3Q969F9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HPS3Q969F9 AP003733.1-201ENST00000491725 852 ntBASIC19.94■□□□□ 0.78
HPS3Q969F9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.94■□□□□ 0.78
HPS3Q969F9 ZNF444P1-201ENST00000559497 298 ntBASIC19.94■□□□□ 0.78
HPS3Q969F9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
HPS3Q969F9 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.94■□□□□ 0.78
HPS3Q969F9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.94■□□□□ 0.78
HPS3Q969F9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS3Q969F9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
HPS3Q969F9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS3Q969F9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.93■□□□□ 0.78
HPS3Q969F9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 KRT89P-201ENST00000620027 1478 ntBASIC19.93■□□□□ 0.78
HPS3Q969F9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 IGHGP-201ENST00000390555 1178 ntBASIC19.93■□□□□ 0.78
HPS3Q969F9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.93■□□□□ 0.78
HPS3Q969F9 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.93■□□□□ 0.78
HPS3Q969F9 SLC25A6P5-201ENST00000435663 894 ntBASIC19.93■□□□□ 0.78
HPS3Q969F9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.93■□□□□ 0.78
HPS3Q969F9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.93■□□□□ 0.78
HPS3Q969F9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.93■□□□□ 0.78
HPS3Q969F9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.93■□□□□ 0.78
HPS3Q969F9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
HPS3Q969F9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS3Q969F9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HPS3Q969F9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HPS3Q969F9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HPS3Q969F9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 GNAS-203ENST00000306120 1878 ntBASIC19.92■□□□□ 0.78
HPS3Q969F9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.92■□□□□ 0.78
HPS3Q969F9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS3Q969F9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HPS3Q969F9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.92■□□□□ 0.78
HPS3Q969F9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.92■□□□□ 0.78
HPS3Q969F9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.92■□□□□ 0.78
HPS3Q969F9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.92■□□□□ 0.78
HPS3Q969F9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.92■□□□□ 0.78
HPS3Q969F9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms