Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 IGHV3-47-201ENST00000425060 335 ntBASIC17.86■□□□□ 0.45
SCAMP4Q969E2 AC246785.2-201ENST00000432512 513 ntBASIC17.86■□□□□ 0.45
SCAMP4Q969E2 VENTXP7-201ENST00000475503 772 ntBASIC17.86■□□□□ 0.45
SCAMP4Q969E2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.86■□□□□ 0.45
SCAMP4Q969E2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 AL354751.1-201ENST00000412768 1863 ntBASIC17.86■□□□□ 0.45
SCAMP4Q969E2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAMP4Q969E2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 NSUN5P1-202ENST00000421140 1535 ntBASIC17.85■□□□□ 0.45
SCAMP4Q969E2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.85■□□□□ 0.45
SCAMP4Q969E2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AC005336.2-201ENST00000593183 939 ntBASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAMP4Q969E2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 PRELID1P1-202ENST00000567272 903 ntBASIC17.84■□□□□ 0.45
SCAMP4Q969E2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 AC100803.2-201ENST00000562459 1963 ntBASIC17.84■□□□□ 0.45
SCAMP4Q969E2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAMP4Q969E2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms