Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 BX088651.1-201ENST00000540551 451 ntBASIC14.22□□□□□ -0.13
NPIPB3Q92617 AC104390.1-201ENST00000555663 520 ntBASIC14.22□□□□□ -0.13
NPIPB3Q92617 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 Z99916.2-201ENST00000604037 246 ntBASIC14.22□□□□□ -0.13
NPIPB3Q92617 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 AL024508.2-201ENST00000607749 1894 ntBASIC14.22□□□□□ -0.13
NPIPB3Q92617 AL645608.8-201ENST00000606034 2086 ntBASIC14.22□□□□□ -0.13
NPIPB3Q92617 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 SIRPAP1-201ENST00000448467 1770 ntBASIC14.22□□□□□ -0.13
NPIPB3Q92617 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB3Q92617 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB3Q92617 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB3Q92617 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 RBM17P1-201ENST00000453646 1190 ntBASIC14.21□□□□□ -0.13
NPIPB3Q92617 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 MIR3180-4-201ENST00000582223 153 ntBASIC14.21□□□□□ -0.13
NPIPB3Q92617 AC116562.4-202ENST00000641738 218 ntBASIC14.21□□□□□ -0.13
NPIPB3Q92617 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB3Q92617 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 AC092338.2-201ENST00000568827 1415 ntBASIC14.21□□□□□ -0.13
NPIPB3Q92617 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB3Q92617 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NPIPB3Q92617 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB3Q92617 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB3Q92617 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB3Q92617 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB3Q92617 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB3Q92617 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.2□□□□□ -0.14
NPIPB3Q92617 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPB3Q92617 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB3Q92617 PP12613-201ENST00000424958 2230 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms