Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 KRT8P32-201ENST00000512863 1461 ntBASIC17.01■□□□□ 0.31
TM9SF4Q92544 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 AC246785.2-201ENST00000432512 513 ntBASIC17.01■□□□□ 0.31
TM9SF4Q92544 GUSBP12-201ENST00000513727 720 ntBASIC17.01■□□□□ 0.31
TM9SF4Q92544 RNF126P1-202ENST00000569893 925 ntBASIC17.01■□□□□ 0.31
TM9SF4Q92544 GPR32P1-201ENST00000601788 811 ntBASIC17.01■□□□□ 0.31
TM9SF4Q92544 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF4Q92544 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF4Q92544 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17■□□□□ 0.31
TM9SF4Q92544 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF4Q92544 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 FDX1P1-201ENST00000449115 551 ntBASIC17■□□□□ 0.31
TM9SF4Q92544 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17■□□□□ 0.31
TM9SF4Q92544 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17■□□□□ 0.31
TM9SF4Q92544 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF4Q92544 AL390719.2-201ENST00000606993 987 ntBASIC17■□□□□ 0.31
TM9SF4Q92544 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TM9SF4Q92544 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF4Q92544 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17■□□□□ 0.31
TM9SF4Q92544 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17■□□□□ 0.31
TM9SF4Q92544 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF4Q92544 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF4Q92544 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 FOSL1P1-201ENST00000511041 816 ntBASIC16.99■□□□□ 0.31
TM9SF4Q92544 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF4Q92544 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF4Q92544 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms