Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 MIR1233-2-201ENST00000408138 82 ntBASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 MIR1233-1-201ENST00000408722 82 ntBASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 AC136632.2-201ENST00000512891 861 ntBASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.78■■■□□ 2.04
CASKIN1Q8WXD9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 AL020989.1-201ENST00000422979 469 ntBASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
CASKIN1Q8WXD9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 MIR940-201ENST00000401276 94 ntBASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 AC004706.3-202ENST00000621574 984 ntBASIC27.76■■■□□ 2.04
CASKIN1Q8WXD9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 AC135776.1-201ENST00000319817 2481 ntBASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.76■■■□□ 2.03
CASKIN1Q8WXD9 AC003669.1-201ENST00000334569 611 ntBASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 AC093503.3-201ENST00000624917 2352 ntBASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 KRT18P3-201ENST00000451602 1288 ntBASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC27.75■■■□□ 2.03
CASKIN1Q8WXD9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
CASKIN1Q8WXD9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CASKIN1Q8WXD9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.74■■■□□ 2.03
CASKIN1Q8WXD9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms