Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 B3GAT3P1-201ENST00000471720 806 ntBASIC16.28■□□□□ 0.2
APH1BQ8WW43 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 AL031985.4-201ENST00000642138 673 ntBASIC16.28■□□□□ 0.2
APH1BQ8WW43 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 CICP6-201ENST00000457191 2729 ntBASIC16.28■□□□□ 0.2
APH1BQ8WW43 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1BQ8WW43 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1BQ8WW43 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 AC133681.1-201ENST00000465482 601 ntBASIC16.27■□□□□ 0.2
APH1BQ8WW43 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.27■□□□□ 0.2
APH1BQ8WW43 MIR4674-201ENST00000582457 87 ntBASIC16.27■□□□□ 0.2
APH1BQ8WW43 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1BQ8WW43 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1BQ8WW43 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
APH1BQ8WW43 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1BQ8WW43 HOXB1-202ENST00000577092 1414 ntBASIC16.27■□□□□ 0.19
APH1BQ8WW43 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
APH1BQ8WW43 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1BQ8WW43 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
APH1BQ8WW43 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 CR392000.1-201ENST00000624770 1228 ntBASIC16.26■□□□□ 0.19
APH1BQ8WW43 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1BQ8WW43 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
APH1BQ8WW43 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms