Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 MTDHP4-201ENST00000600287 670 ntBASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 TERC-201ENST00000602385 541 ntBASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 KRT8P47-201ENST00000604727 1398 ntBASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SH3TC1Q8TE82 PMS2P7-201ENST00000506558 1336 ntBASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 AC139530.3-201ENST00000620344 690 ntBASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 AC008735.5-201ENST00000623544 497 ntBASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 AC104109.2-201ENST00000602919 1418 ntBASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 AL020996.1-203ENST00000536896 2307 ntBASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.32■■□□□ 1.16
SH3TC1Q8TE82 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 AC098831.1-202ENST00000438821 336 ntBASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 AC092910.1-201ENST00000482027 1129 ntBASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 AC122714.2-201ENST00000502787 707 ntBASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 AC107918.4-202ENST00000641623 219 ntBASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 MIR940-201ENST00000401276 94 ntBASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 DUTP2-201ENST00000519164 463 ntBASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3TC1Q8TE82 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 PMPCAP1-201ENST00000508114 1576 ntBASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC1Q8TE82 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms