Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AC068472.1-201ENST00000474589 881 ntBASIC19.06■□□□□ 0.64
UBA3Q8TBC4 DUTP2-201ENST00000519164 463 ntBASIC19.06■□□□□ 0.64
UBA3Q8TBC4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AC009154.2-201ENST00000621177 724 ntBASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AC124864.1-201ENST00000623408 392 ntBASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 AC100803.2-201ENST00000562459 1963 ntBASIC19.06■□□□□ 0.64
UBA3Q8TBC4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.06■□□□□ 0.64
UBA3Q8TBC4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 TSSC2-201ENST00000450217 709 ntBASIC19.05■□□□□ 0.64
UBA3Q8TBC4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 GUSBP12-201ENST00000513727 720 ntBASIC19.05■□□□□ 0.64
UBA3Q8TBC4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 AC093458.2-201ENST00000623150 629 ntBASIC19.05■□□□□ 0.64
UBA3Q8TBC4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 BCL2-203ENST00000589955 5011 ntBASIC19.05■□□□□ 0.64
UBA3Q8TBC4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBA3Q8TBC4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 UPK3BP1-201ENST00000428678 509 ntBASIC19.04■□□□□ 0.64
UBA3Q8TBC4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 RN7SL606P-201ENST00000472779 293 ntBASIC19.04■□□□□ 0.64
UBA3Q8TBC4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms