Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 AL049597.2-201ENST00000565575 961 ntBASIC19.27■□□□□ 0.68
LMO3Q8TAP4 NTF6B-201ENST00000591913 560 ntBASIC19.27■□□□□ 0.68
LMO3Q8TAP4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LMO3Q8TAP4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LMO3Q8TAP4 PP12613-201ENST00000424958 2230 ntBASIC19.27■□□□□ 0.67
LMO3Q8TAP4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.27■□□□□ 0.67
LMO3Q8TAP4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 FAM86EP-206ENST00000510506 987 ntBASIC19.26■□□□□ 0.67
LMO3Q8TAP4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 LINC00304-203ENST00000565008 1864 ntBASIC19.26■□□□□ 0.67
LMO3Q8TAP4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO3Q8TAP4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 AL121956.5-201ENST00000625261 221 ntBASIC19.25■□□□□ 0.67
LMO3Q8TAP4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO3Q8TAP4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 AL845331.1-201ENST00000424978 1190 ntBASIC19.24■□□□□ 0.67
LMO3Q8TAP4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 DDX43P3-201ENST00000441064 443 ntBASIC19.24■□□□□ 0.67
LMO3Q8TAP4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 AC011498.5-201ENST00000592027 486 ntBASIC19.24■□□□□ 0.67
LMO3Q8TAP4 AL353801.3-201ENST00000609898 542 ntBASIC19.24■□□□□ 0.67
LMO3Q8TAP4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms