Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 FAM8A6P-201ENST00000407496 1135 ntBASIC16.87■□□□□ 0.29
NUP43Q8NFH3 HLA-F-220ENST00000434407 884 ntBASIC16.87■□□□□ 0.29
NUP43Q8NFH3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 AC006011.2-201ENST00000621313 1158 ntBASIC16.87■□□□□ 0.29
NUP43Q8NFH3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 KRT18P48-201ENST00000434763 852 ntBASIC16.86■□□□□ 0.29
NUP43Q8NFH3 HOMER2P1-201ENST00000455653 964 ntBASIC16.86■□□□□ 0.29
NUP43Q8NFH3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 AC092597.1-201ENST00000487352 616 ntBASIC16.86■□□□□ 0.29
NUP43Q8NFH3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 AC012317.2-201ENST00000623305 2251 ntBASIC16.86■□□□□ 0.29
NUP43Q8NFH3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NUP43Q8NFH3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 KRT18P38-201ENST00000449496 1282 ntBASIC16.85■□□□□ 0.29
NUP43Q8NFH3 AL359075.1-203ENST00000462729 1002 ntBASIC16.85■□□□□ 0.29
NUP43Q8NFH3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 LETM1P2-201ENST00000597330 2178 ntBASIC16.85■□□□□ 0.29
NUP43Q8NFH3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUP43Q8NFH3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms