Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 HBZP1-201ENST00000354915 429 ntBASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 HLA-F-220ENST00000434407 884 ntBASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 HOMER2P1-201ENST00000455653 964 ntBASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 AC092647.4-201ENST00000457211 535 ntBASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 AC083849.1-201ENST00000615227 514 ntBASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 AC132938.6-201ENST00000623828 1655 ntBASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 AC067852.2-201ENST00000590513 2313 ntBASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIMC1Q8NDZ2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIMC1Q8NDZ2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIMC1Q8NDZ2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.96■□□□□ 0.3
SIMC1Q8NDZ2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SIMC1Q8NDZ2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SIMC1Q8NDZ2 AC093010.1-201ENST00000473625 1624 ntBASIC16.96■□□□□ 0.3
SIMC1Q8NDZ2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIMC1Q8NDZ2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIMC1Q8NDZ2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms