Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A9Q8NBW4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A9Q8NBW4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SLC38A9Q8NBW4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC38A9Q8NBW4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A9Q8NBW4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A9Q8NBW4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 RBM17P3-201ENST00000417687 1192 ntBASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 AL031284.1-201ENST00000419297 478 ntBASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 RNPS1P1-201ENST00000507437 918 ntBASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC38A9Q8NBW4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 AL590627.1-203ENST00000421194 1026 ntBASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 ABCD1P5-201ENST00000445663 754 ntBASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 AC018712.1-201ENST00000455767 687 ntBASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 BX640515.1-201ENST00000617215 977 ntBASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC38A9Q8NBW4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 AC007967.3-201ENST00000434308 558 ntBASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 AF186996.4-201ENST00000467186 377 ntBASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 AL049840.3-201ENST00000602669 611 ntBASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 AC120114.3-201ENST00000611923 658 ntBASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms