Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 AC010653.2-201ENST00000623505 997 ntBASIC18.7■□□□□ 0.58
CCDC89Q8N998 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 AP006294.2-201ENST00000641667 209 ntBASIC18.7■□□□□ 0.58
CCDC89Q8N998 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC89Q8N998 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC89Q8N998 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 SNORA78-201ENST00000459373 127 ntBASIC18.69■□□□□ 0.58
CCDC89Q8N998 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC89Q8N998 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 AL024508.2-201ENST00000607749 1894 ntBASIC18.69■□□□□ 0.58
CCDC89Q8N998 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC89Q8N998 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 TSPY14P-201ENST00000303979 915 ntBASIC18.68■□□□□ 0.58
CCDC89Q8N998 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 AC010240.3-201ENST00000607688 395 ntBASIC18.68■□□□□ 0.58
CCDC89Q8N998 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC89Q8N998 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC89Q8N998 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 NFIC-211ENST00000641145 8399 ntBASIC18.67■□□□□ 0.58
CCDC89Q8N998 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 AC128688.1-201ENST00000487626 519 ntBASIC18.67■□□□□ 0.58
CCDC89Q8N998 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 AL355075.4-201ENST00000554988 638 ntBASIC18.67■□□□□ 0.58
CCDC89Q8N998 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms