Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 IGHV3-47-201ENST00000425060 335 ntBASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 AC074051.2-201ENST00000565115 352 ntBASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 AC005336.2-201ENST00000593183 939 ntBASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAM1L1Q8N609 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAM1L1Q8N609 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAM1L1Q8N609 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAM1L1Q8N609 KRT18P55-202ENST00000578578 1546 ntBASIC17.77■□□□□ 0.43
TRAM1L1Q8N609 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAM1L1Q8N609 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 MIR3652-201ENST00000579335 131 ntBASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAM1L1Q8N609 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 AC125634.1-201ENST00000438758 1403 ntBASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 KRT18P56-201ENST00000507275 550 ntBASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 AC116407.2-201ENST00000613639 860 ntBASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 NSUN5P1-202ENST00000421140 1535 ntBASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 NSUN5P2-203ENST00000457352 1529 ntBASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAM1L1Q8N609 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms