Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 TNXA-203ENST00000507684 2038 ntBASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 AC103564.2-201ENST00000432853 1299 ntBASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 MIR1199-201ENST00000621445 119 ntBASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 AP000974.1-201ENST00000623909 2387 ntBASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 ALG1L5P-201ENST00000482043 771 ntBASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ARHGEF28Q8N1W1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AL049757.1-201ENST00000616842 1596 ntBASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AC135776.1-201ENST00000319817 2481 ntBASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 BX323043.1-201ENST00000641006 1765 ntBASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AC004832.2-201ENST00000426397 482 ntBASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
ARHGEF28Q8N1W1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 AC040169.1-201ENST00000565382 521 ntBASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ARHGEF28Q8N1W1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 GPX1P2-201ENST00000429271 606 ntBASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
ARHGEF28Q8N1W1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms