Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 AC145285.6-201ENST00000604632 637 ntBASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 AL023973.1-201ENST00000624619 620 ntBASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00346Q8IVM7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00346Q8IVM7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 AP000523.1-201ENST00000398242 1049 ntBASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 GCSHP2-201ENST00000560971 527 ntBASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 AC132938.6-201ENST00000623828 1655 ntBASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC00346Q8IVM7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms