Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AC069262.1-201ENST00000539058 672 ntBASIC22.45■■□□□ 1.18
COL23A1Q86Y22 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AC132938.5-201ENST00000624980 1813 ntBASIC22.45■■□□□ 1.18
COL23A1Q86Y22 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AL049812.1-201ENST00000432563 2267 ntBASIC22.45■■□□□ 1.18
COL23A1Q86Y22 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 MRPL20P1-201ENST00000400819 433 ntBASIC22.44■■□□□ 1.18
COL23A1Q86Y22 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 AC025678.2-201ENST00000562061 970 ntBASIC22.44■■□□□ 1.18
COL23A1Q86Y22 AL161938.1-201ENST00000569833 2180 ntBASIC22.44■■□□□ 1.18
COL23A1Q86Y22 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL23A1Q86Y22 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 AL353593.2-201ENST00000602529 1483 ntBASIC22.43■■□□□ 1.18
COL23A1Q86Y22 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 AC015922.1-201ENST00000421102 1152 ntBASIC22.43■■□□□ 1.18
COL23A1Q86Y22 AC005034.1-201ENST00000426657 489 ntBASIC22.43■■□□□ 1.18
COL23A1Q86Y22 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 AC093520.2-201ENST00000561830 333 ntBASIC22.43■■□□□ 1.18
COL23A1Q86Y22 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 SIRPAP1-201ENST00000448467 1770 ntBASIC22.43■■□□□ 1.18
COL23A1Q86Y22 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL23A1Q86Y22 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 COPE-202ENST00000349893 948 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 Z92544.3-201ENST00000624747 417 ntBASIC22.42■■□□□ 1.18
COL23A1Q86Y22 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.42■■□□□ 1.18
COL23A1Q86Y22 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 AC005082.1-201ENST00000413042 2259 ntBASIC22.41■■□□□ 1.18
COL23A1Q86Y22 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 AL805961.1-202ENST00000641562 540 ntBASIC22.41■■□□□ 1.18
COL23A1Q86Y22 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms