Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
VRK2Q86Y07 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK2Q86Y07 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 LIN28AP1-201ENST00000429574 405 ntBASIC16.65■□□□□ 0.26
VRK2Q86Y07 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 AC133561.5-201ENST00000635547 218 ntBASIC16.65■□□□□ 0.26
VRK2Q86Y07 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK2Q86Y07 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK2Q86Y07 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VRK2Q86Y07 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 ATP5G1P1-201ENST00000448724 379 ntBASIC16.64■□□□□ 0.25
VRK2Q86Y07 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 AC008687.5-201ENST00000593746 558 ntBASIC16.64■□□□□ 0.25
VRK2Q86Y07 AC140113.3-201ENST00000605663 199 ntBASIC16.64■□□□□ 0.25
VRK2Q86Y07 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.64■□□□□ 0.25
VRK2Q86Y07 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK2Q86Y07 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK2Q86Y07 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VRK2Q86Y07 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms