Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.21■□□□□ 0.51
PACS1Q6VY07 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 GCSHP2-201ENST00000560971 527 ntBASIC18.21■□□□□ 0.51
PACS1Q6VY07 MIR3917-201ENST00000580971 93 ntBASIC18.21■□□□□ 0.51
PACS1Q6VY07 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 AL023973.1-201ENST00000624619 620 ntBASIC18.21■□□□□ 0.51
PACS1Q6VY07 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PACS1Q6VY07 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PACS1Q6VY07 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PACS1Q6VY07 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PACS1Q6VY07 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PACS1Q6VY07 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.2■□□□□ 0.5
PACS1Q6VY07 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS1Q6VY07 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 KRT18P57-201ENST00000443599 1254 ntBASIC18.19■□□□□ 0.5
PACS1Q6VY07 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 YBX1P2-201ENST00000489612 999 ntBASIC18.19■□□□□ 0.5
PACS1Q6VY07 AC034232.1-201ENST00000506026 1064 ntBASIC18.19■□□□□ 0.5
PACS1Q6VY07 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 AL441883.1-201ENST00000566170 1045 ntBASIC18.19■□□□□ 0.5
PACS1Q6VY07 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 AC140113.3-201ENST00000605663 199 ntBASIC18.19■□□□□ 0.5
PACS1Q6VY07 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS1Q6VY07 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PACS1Q6VY07 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 RCN1P1-201ENST00000400413 996 ntBASIC18.18■□□□□ 0.5
PACS1Q6VY07 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.18■□□□□ 0.5
PACS1Q6VY07 AC117947.1-201ENST00000427448 529 ntBASIC18.18■□□□□ 0.5
PACS1Q6VY07 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 AC139887.4-201ENST00000607877 719 ntBASIC18.18■□□□□ 0.5
PACS1Q6VY07 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
PACS1Q6VY07 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS1Q6VY07 AL645608.8-201ENST00000606034 2086 ntBASIC18.18■□□□□ 0.5
PACS1Q6VY07 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms