Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 AC108073.2-201ENST00000464002 357 ntBASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 MIR4751-201ENST00000578027 74 ntBASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 C20orf181-201ENST00000623918 480 ntBASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 AC092865.6-201ENST00000642101 219 ntBASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNKSR3Q6P9H4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CNKSR3Q6P9H4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
CNKSR3Q6P9H4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CNKSR3Q6P9H4 AC006504.4-201ENST00000592118 1568 ntBASIC19.27■□□□□ 0.67
CNKSR3Q6P9H4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNKSR3Q6P9H4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CNKSR3Q6P9H4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 ESPNP-201ENST00000270691 2015 ntBASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 VN2R19P-201ENST00000442399 1052 ntBASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNKSR3Q6P9H4 NCF1C-201ENST00000438382 1427 ntBASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 AL353593.2-201ENST00000602529 1483 ntBASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 CYMP-203ENST00000474680 1263 ntBASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 RFPL4AP1-201ENST00000530883 850 ntBASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNKSR3Q6P9H4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 PRSS29P-201ENST00000440800 595 ntBASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 HCG4B-203ENST00000450128 991 ntBASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 IGHV3-65-201ENST00000523210 341 ntBASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 AC018845.2-201ENST00000568326 409 ntBASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 AC008667.4-201ENST00000607370 168 ntBASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNKSR3Q6P9H4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms